> Reference >

dynmethods

dynmethods 1.0.1

MAJOR CHANGE: Compatibility with dynwrap v1.0.0
MAJOR CHANGE: dynmethods package is now coupled to particular tags of dynmethods containers
MAJOR CHANGE: The format of the dynmethods::methods object has been changed.
MAJOR CHANGE: All methods now work with sparse matrices and dyncli
DOCUMENTATION: Improved method documentation

Trajectory inference methods Trajectory inference methods
`ti_angle`	Angle
`ti_calista`	CALISTA
`ti_cellrouter`	CellRouter
`ti_celltrails`	CellTrails
`ti_celltree_gibbs`	cellTree Gibbs
`ti_celltree_maptpx`	cellTree maptpx
`ti_celltree_vem`	cellTree vem
`ti_comp1`	Component 1
`ti_dpt`	DPT
`ti_elpicycle`	ElPiGraph - Cycle
`ti_elpigraph`	ElPiGraph
`ti_elpilinear`	ElPiGraph - Linear
`ti_embeddr`	Embeddr
`ti_error`	Error
`ti_fateid`	FateID
`ti_forks`	FORKS
`ti_gng`	GNG
`ti_gpfates`	GPfates
`ti_grandprix`	GrandPrix
`ti_identity`	Identity
`ti_matcher`	MATCHER
`ti_merlot`	MERLoT
`ti_mfa`	MFA
`ti_monocle_ddrtree`	Monocle DDRTree
`ti_monocle_ica`	Monocle ICA
`ti_mpath`	Mpath
`ti_mst`	MST
`ti_ouija`	ouija
`ti_ouijaflow`	ouijaflow
`ti_paga`	PAGA
`ti_paga_tree`	PAGA Tree
`ti_pcreode`	pCreode
`ti_periodpc`	Periodic PrinCurve
`ti_phenopath`	PhenoPath
`ti_projected_dpt`	Projected DPT
`ti_projected_monocle`	Projected Monocle
`ti_projected_paga`	Projected PAGA
`ti_projected_slingshot`	Projected Slingshot
`ti_projected_tscan`	Projected TSCAN
`ti_pseudogp`	pseudogp
`ti_raceid_stemid`	RaceID / StemID
`ti_random`	Random
`ti_recat`	reCAT
`ti_scimitar`	SCIMITAR
`ti_scorpius`	SCORPIUS
`ti_scoup`	SCOUP
`ti_scuba`	SCUBA
`ti_shuffle`	shuffle
`ti_sincell`	Sincell
`ti_slice`	SLICE
`ti_slicer`	SLICER
`ti_slingshot`	Slingshot
`ti_stemnet`	STEMNET
`ti_topslam`	topslam
`ti_tscan`	TSCAN
`ti_urd`	URD
`ti_wanderlust`	Wanderlust
`ti_waterfall`	Waterfall
`ti_wishbone`	Wishbone
Other
`dynmethods` `dynmethods-package`	Wrappers for trajectory inference methods
`methods`	Metadata on the different TI methods