dynwrap :: Calculations from a trajectory

Deriving features from a trajectory model

calculate_pseudotime add_pseudotime

Add or calculate pseudotime as distance from the root


Calculate mean values per cell group


Calculate mean values by milestone percentages

calculate_geodesic_distances compute_tented_geodesic_distances

Calculate geodesic distances between cells in a trajectory


Layout the trajectory and its cells in 2 dimensions

group_from_trajectory group_onto_trajectory_edges group_onto_nearest_milestones

Create a grouping from a trajectory