dyneval

dyneval 0.9.9 (07-04-2019)

  • MINOR CHANGE: Update categories of metrics

  • MINOR CHANGE: Move metric functions from dyneval to dynutils.

  • MINOR CHANGE: Bump version number for dynwrap 1.0.0

dyneval 0.2.2 (21-11-2018)

  • DOCUMENTATION: Update and expand documentation.

  • BUG FIX: Update dyneval for dynwrap 0.3.1 (#50).

  • MINOR CHANGE: Clean up imports and suggests.

Evaluating methods

Methods to compare different TI methods

evaluate_ti_method

Running an evaluation of a method on a set of datasets with a set of parameters

Metrics for comparing trajectories

Metrics for comparing two trajectories

calculate_edge_flip

Edge flip score

calculate_featureimp_cor

Compare feature importances derived by both trajectories

calculate_featureimp_enrichment

Compare enrichment in finding back the most important genes

calculate_him

netdist scores

calculate_mapping calculate_mapping_milestones calculate_mapping_branches

Compares the mapping between milestones or branches

calculate_metrics

Calculate the similarity between two trajectory models.

calculate_position_predict

Compute metrics related to the prediction of the positions

metrics

Metadata on metrics

Other

dyneval dyneval-package

Evaluating trajectory inference methods