| dynbenchmark |
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Scripts to reproduce manuscript |
| dyno |
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Complete TI pipeline for end-users |
| dyndimred |
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Commonly used dimensionality reduction methods |
| dyneval |
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Metrics and evaluation pipeline |
| dynfeature |
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Feature selection for trajectories |
| dyngen |
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Generator of synthetic datasets |
| dynguidelines |
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Interactive guidelines using the results of dynbenchmark |
| dynmethods |
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Wrappers for trajectory inference methods |
| dynnormaliser |
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Common normalisation functionality |
| dynplot |
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Common visualisation functionality |
| dyntoy |
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Quick generator of small toy datasets |
| dynutils |
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Various common functions |
| dynwrap |
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Common trajectory wrapping functionality |