Will generate a trajectory using CALISTA.
This method was wrapped inside a container. The original code of this method is available here.
ti_calista(runs = 50L, max_iter = 100L, run_environment = NULL)
| runs | integer; Number of independent runs of greedy algorithm (default:
|
|---|---|
| max_iter | integer; Number of iterations in greedy algorithm (default:
|
| run_environment | In which environment to run the method, can be |
A TI method wrapper to be used together with
infer_trajectory
Papili Gao, N., Hartmann, T., Gunawan, R., 2018. CALISTA: Clustering And Lineage Inference in Single-Cell Transcriptional Analysis.