Determine the positions of all cells in the trajectory

determine_cell_trajectory_positions(milestone_ids, milestone_network,
  milestone_percentages, progressions, divergence_regions)

Arguments

milestone_ids

The ids of the milestones in the trajectory. Type: Character vector.

milestone_network

The network of the milestones. Type: Data frame(from = character, to = character, length = numeric, directed = logical).

milestone_percentages

A data frame specifying what percentage milestone each cell consists of. Type: Data frame(cell_id = character, milestone_id = character, percentage = numeric).

progressions

Specifies the progression of a cell along a transition in the milestone_network. Type: Data frame(cell_id = character, from = character, to = character, percentage = numeric).

divergence_regions

A data frame specifying the divergence regions between milestones (e.g. a bifurcation). Type: Data frame(divergence_id = character, milestone_id = character, is_start = logical).